Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF25Q93038 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 BCRP1-201ENST00000444246 691 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 TIMM17BP1-201ENST00000545713 516 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC023310.3-201ENST00000557027 670 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC100756.1-201ENST00000562736 682 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC138749.3-201ENST00000567691 622 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 AC116165.1-201ENST00000611806 668 ntBASIC17.83■□□□□ 0.44
TNFRSF25Q93038 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF25Q93038 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 GNAQP1-201ENST00000444815 1067 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 INGX-202ENST00000489074 768 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 SPCS2P1-201ENST00000561636 679 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 AL355385.1-201ENST00000606123 409 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 AC025181.2-201ENST00000606994 802 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 AJ011932.1-201ENST00000621707 465 ntBASIC17.82■□□□□ 0.44
TNFRSF25Q93038 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF25Q93038 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 AC091951.1-201ENST00000512854 2465 ntBASIC17.81■□□□□ 0.44
TNFRSF25Q93038 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF25Q93038 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms