Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTC1Q2NKJ3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 RPL13AP20-201ENST00000459725 609 ntBASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 FAM86LP-201ENST00000478302 853 ntBASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AC079316.1-201ENST00000548397 411 ntBASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 DUX4L45-201ENST00000566406 1057 ntBASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.85■□□□□ 0.29
CTC1Q2NKJ3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC006033.1-201ENST00000440505 426 ntBASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC124283.3-201ENST00000570869 594 ntBASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 AC012183.1-201ENST00000625197 499 ntBASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTC1Q2NKJ3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms