Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.47■□□□□ 0.55
RHBDL3P58872 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 AC008687.7-202ENST00000637404 953 ntBASIC18.47■□□□□ 0.55
RHBDL3P58872 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
RHBDL3P58872 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RHBDL3P58872 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 HCG11-201ENST00000411553 5696 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RHBDL3P58872 RNU1-114P-201ENST00000365297 166 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
RHBDL3P58872 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 FAM197Y7-201ENST00000432892 766 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 AL355994.2-201ENST00000447882 704 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.46■□□□□ 0.55
RHBDL3P58872 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.46■□□□□ 0.55
RHBDL3P58872 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 PRSS30P-206ENST00000641773 873 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 AC127383.1-201ENST00000444697 1800 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RHBDL3P58872 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.46■□□□□ 0.55
RHBDL3P58872 AC084364.1-201ENST00000551967 1556 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHBDL3P58872 KRT8P35-201ENST00000483942 1338 ntBASIC18.46■□□□□ 0.55
RHBDL3P58872 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.46■□□□□ 0.55
RHBDL3P58872 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RHBDL3P58872 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
RHBDL3P58872 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC006001.1-201ENST00000325130 474 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 FAM21FP-201ENST00000426241 1131 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 C2orf27AP3-201ENST00000434123 579 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.45■□□□□ 0.54
RHBDL3P58872 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC078819.1-201ENST00000547454 765 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 AC012085.1-201ENST00000548270 765 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 AC079316.1-201ENST00000548397 411 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.45■□□□□ 0.54
RHBDL3P58872 AL354718.3-201ENST00000616414 581 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 MIR6869-201ENST00000619434 62 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 CR382287.1-201ENST00000623954 586 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.45■□□□□ 0.54
RHBDL3P58872 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.45■□□□□ 0.54
RHBDL3P58872 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.45■□□□□ 0.54
RHBDL3P58872 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
RHBDL3P58872 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHBDL3P58872 AC148477.4-201ENST00000613430 1793 ntBASIC18.45■□□□□ 0.54
RHBDL3P58872 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RHBDL3P58872 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms