Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NUP98P52948 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.27■□□□□ 0.68
NUP98P52948 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 SERPINA13P-202ENST00000478994 924 ntBASIC19.27■□□□□ 0.68
NUP98P52948 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NUP98P52948 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP98P52948 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP98P52948 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NUP98P52948 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.27■□□□□ 0.67
NUP98P52948 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NUP98P52948 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NUP98P52948 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUP98P52948 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUP98P52948 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NUP98P52948 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NUP98P52948 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NUP98P52948 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NUP98P52948 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP98P52948 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP98P52948 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.26■□□□□ 0.67
NUP98P52948 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.26■□□□□ 0.67
NUP98P52948 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.26■□□□□ 0.67
NUP98P52948 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP98P52948 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 AC020916.1-201ENST00000587762 1774 ntBASIC19.26■□□□□ 0.67
NUP98P52948 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP98P52948 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP98P52948 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NUP98P52948 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP98P52948 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.25■□□□□ 0.67
NUP98P52948 AC097724.1-201ENST00000609581 426 ntBASIC19.25■□□□□ 0.67
NUP98P52948 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 AC010491.1-201ENST00000563101 2797 ntBASIC19.25■□□□□ 0.67
NUP98P52948 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP98P52948 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NUP98P52948 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP98P52948 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP98P52948 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP98P52948 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 RPL5P21-201ENST00000404620 815 ntBASIC19.25■□□□□ 0.67
NUP98P52948 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.25■□□□□ 0.67
NUP98P52948 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP98P52948 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 HIST2H2BB-201ENST00000449108 381 ntBASIC19.25■□□□□ 0.67
NUP98P52948 HIST2H2BC-201ENST00000498492 580 ntBASIC19.25■□□□□ 0.67
NUP98P52948 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP98P52948 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.25■□□□□ 0.67
NUP98P52948 AC044849.1-201ENST00000519737 1188 ntBASIC19.25■□□□□ 0.67
NUP98P52948 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.25■□□□□ 0.67
NUP98P52948 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP98P52948 MIR4783-201ENST00000580343 82 ntBASIC19.25■□□□□ 0.67
NUP98P52948 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms