Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGN1P05114 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGN1P05114 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGN1P05114 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
HMGN1P05114 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGN1P05114 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGN1P05114 BNIP3P1-202ENST00000550043 1585 ntBASIC14.39□□□□□ -0.11
HMGN1P05114 AC127383.1-201ENST00000444697 1800 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 REXO1L1P-202ENST00000608646 1974 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.38□□□□□ -0.11
HMGN1P05114 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.38□□□□□ -0.11
HMGN1P05114 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.38□□□□□ -0.11
HMGN1P05114 AC079776.4-201ENST00000511039 504 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 RNA5SP415-201ENST00000517246 115 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 SPTSSB-204ENST00000617024 1292 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 AC116407.3-201ENST00000623905 1129 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 AC025580.3-201ENST00000617932 1424 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGN1P05114 AC067750.1-201ENST00000608826 6545 ntBASIC14.38□□□□□ -0.11
HMGN1P05114 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGN1P05114 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGN1P05114 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGN1P05114 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 AC007292.2-201ENST00000593524 1812 ntBASIC14.37□□□□□ -0.11
HMGN1P05114 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HMGN1P05114 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HMGN1P05114 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HMGN1P05114 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
HMGN1P05114 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.37□□□□□ -0.11
HMGN1P05114 AC061975.2-201ENST00000581722 295 ntBASIC14.37□□□□□ -0.11
HMGN1P05114 AC073389.1-201ENST00000595595 795 ntBASIC14.37□□□□□ -0.11
HMGN1P05114 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.37□□□□□ -0.11
HMGN1P05114 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.37□□□□□ -0.11
HMGN1P05114 AC004877.2-201ENST00000623941 599 ntBASIC14.37□□□□□ -0.11
HMGN1P05114 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms