Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAPPC4Q9Y296 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAPPC4Q9Y296 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAPPC4Q9Y296 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PKD1P5-201ENST00000532415 10291 ntBASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PRAL-201ENST00000624952 3286 ntBASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 HAUS4P1-201ENST00000406739 1145 ntBASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 AL691403.2-201ENST00000618460 490 ntBASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAPPC4Q9Y296 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 C8orf49-201ENST00000525043 1968 ntBASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 RBPMS2P1-201ENST00000437762 623 ntBASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AL512356.2-201ENST00000546955 174 ntBASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AL596442.2-201ENST00000610240 980 ntBASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 CICP23-201ENST00000605013 2741 ntBASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC4Q9Y296 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.55□□□□□ -0.08
TRAPPC4Q9Y296 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms