Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 AC138649.2-201ENST00000615886 705 ntBASIC21.21■□□□□ 0.99
PHF8Q9UPP1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHF8Q9UPP1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
PHF8Q9UPP1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
PHF8Q9UPP1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 FLJ38576-201ENST00000623820 2459 ntBASIC21.2■□□□□ 0.98
PHF8Q9UPP1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 AL139094.1-201ENST00000405549 1188 ntBASIC21.2■□□□□ 0.98
PHF8Q9UPP1 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 COX5BP1-201ENST00000507622 393 ntBASIC21.2■□□□□ 0.98
PHF8Q9UPP1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 PPY2P-201ENST00000582808 702 ntBASIC21.2■□□□□ 0.98
PHF8Q9UPP1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.2■□□□□ 0.98
PHF8Q9UPP1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 LRRC59-203ENST00000576448 1531 ntBASIC21.19■□□□□ 0.98
PHF8Q9UPP1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AC012313.1-201ENST00000593393 3059 ntBASIC21.19■□□□□ 0.98
PHF8Q9UPP1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AC245884.6-201ENST00000515672 1067 ntBASIC21.19■□□□□ 0.98
PHF8Q9UPP1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AP001505.2-201ENST00000616815 443 ntBASIC21.19■□□□□ 0.98
PHF8Q9UPP1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PHF8Q9UPP1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 MIR769-201ENST00000390225 118 ntBASIC21.18■□□□□ 0.98
PHF8Q9UPP1 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.18■□□□□ 0.98
PHF8Q9UPP1 RN7SL720P-201ENST00000488178 304 ntBASIC21.18■□□□□ 0.98
PHF8Q9UPP1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 CU633904.3-201ENST00000624042 1029 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms