Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ACTG1P2-201ENST00000415776 1125 ntBASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ACTG1P11-201ENST00000425411 1125 ntBASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 MIR4750-201ENST00000584564 56 ntBASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM43Q96BQ3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 IQSEC3P1-201ENST00000538799 536 ntBASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM43Q96BQ3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AL355334.1-201ENST00000417713 215 ntBASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AC012618.1-201ENST00000461223 412 ntBASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AC104784.1-201ENST00000473096 294 ntBASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms