Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Gm17330-201ENSMUST00000221047 165 ntBASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh18Q8VHR0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Gm12151-201ENSMUST00000121374 290 ntBASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh18Q8VHR0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm15487-201ENSMUST00000122373 465 ntBASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm9797-201ENSMUST00000052902 613 ntBASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms