Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Gm35960-201ENSMUST00000202712 767 ntBASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Gm44069-201ENSMUST00000204898 506 ntBASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lysmd4Q8CC84 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm5687-201ENSMUST00000118252 640 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm14760-201ENSMUST00000121831 999 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm27989-201ENSMUST00000184721 107 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm8227-201ENSMUST00000223306 571 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lysmd4Q8CC84 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms