Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.77□□□□□ -0.21
UBA52P62987 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 ACTG1P4-201ENST00000425123 1122 ntBASIC13.77□□□□□ -0.21
UBA52P62987 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBA52P62987 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.77□□□□□ -0.21
UBA52P62987 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.77□□□□□ -0.21
UBA52P62987 AC023141.5-201ENST00000458585 616 ntBASIC13.77□□□□□ -0.21
UBA52P62987 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.77□□□□□ -0.21
UBA52P62987 HLA-J-203ENST00000494367 1087 ntBASIC13.77□□□□□ -0.21
UBA52P62987 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.77□□□□□ -0.21
UBA52P62987 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 LINC00528-201ENST00000600723 2160 ntBASIC13.77□□□□□ -0.21
UBA52P62987 AL096865.1-201ENST00000606796 927 ntBASIC13.77□□□□□ -0.21
UBA52P62987 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.77□□□□□ -0.21
UBA52P62987 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.77□□□□□ -0.21
UBA52P62987 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 PRAL-201ENST00000624952 3286 ntBASIC13.77□□□□□ -0.21
UBA52P62987 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 AC139749.1-202ENST00000617529 3139 ntBASIC13.77□□□□□ -0.21
UBA52P62987 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBA52P62987 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.76□□□□□ -0.21
UBA52P62987 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBA52P62987 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UBA52P62987 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.76□□□□□ -0.21
UBA52P62987 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 AL513480.1-201ENST00000451731 511 ntBASIC13.76□□□□□ -0.21
UBA52P62987 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.76□□□□□ -0.21
UBA52P62987 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 AC112191.1-201ENST00000523689 701 ntBASIC13.76□□□□□ -0.21
UBA52P62987 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.76□□□□□ -0.21
UBA52P62987 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 AC022145.2-201ENST00000598203 171 ntBASIC13.76□□□□□ -0.21
UBA52P62987 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.76□□□□□ -0.21
UBA52P62987 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBA52P62987 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 AC112504.1-201ENST00000623415 1841 ntBASIC13.76□□□□□ -0.21
UBA52P62987 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UBA52P62987 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBA52P62987 CDC14C-201ENST00000428251 1719 ntBASIC13.76□□□□□ -0.21
UBA52P62987 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
UBA52P62987 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UBA52P62987 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms