Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
GABRA4P48169 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
GABRA4P48169 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GABRA4P48169 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GABRA4P48169 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 U91328.1-201ENST00000437528 223 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 KRT17P7-201ENST00000451704 1104 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 GIMAP3P-201ENST00000495150 836 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 AC011495.1-201ENST00000498085 584 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.93□□□□□ -0.02
GABRA4P48169 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 AL359711.2-201ENST00000563105 872 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 AC124283.3-201ENST00000570869 594 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
GABRA4P48169 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.93□□□□□ -0.02
GABRA4P48169 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 AL033527.5-201ENST00000641382 801 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 AC046158.3-201ENST00000624947 2558 ntBASIC14.93□□□□□ -0.02
GABRA4P48169 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GABRA4P48169 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
GABRA4P48169 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.93□□□□□ -0.02
GABRA4P48169 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.92□□□□□ -0.02
GABRA4P48169 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.92□□□□□ -0.02
GABRA4P48169 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GABRA4P48169 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GABRA4P48169 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.92□□□□□ -0.02
GABRA4P48169 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 AL049840.4-201ENST00000602422 811 ntBASIC14.92□□□□□ -0.02
GABRA4P48169 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.92□□□□□ -0.02
GABRA4P48169 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABRA4P48169 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.92□□□□□ -0.02
GABRA4P48169 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
GABRA4P48169 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.91□□□□□ -0.02
GABRA4P48169 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 1427.2 ms