Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 MIR3909-201ENST00000579518 119 ntBASIC16.22■□□□□ 0.19
MT-ND3P03897 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 AL355385.1-201ENST00000606123 409 ntBASIC16.22■□□□□ 0.19
MT-ND3P03897 ACTL9-202ENST00000612068 1252 ntBASIC16.22■□□□□ 0.19
MT-ND3P03897 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MT-ND3P03897 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND3P03897 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND3P03897 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND3P03897 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
MT-ND3P03897 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MT-ND3P03897 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND3P03897 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND3P03897 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MT-ND3P03897 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.21■□□□□ 0.19
MT-ND3P03897 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.21■□□□□ 0.19
MT-ND3P03897 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND3P03897 AL513480.1-201ENST00000451731 511 ntBASIC16.21■□□□□ 0.19
MT-ND3P03897 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MT-ND3P03897 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.21■□□□□ 0.19
MT-ND3P03897 AC112191.1-201ENST00000523689 701 ntBASIC16.21■□□□□ 0.19
MT-ND3P03897 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 AL365330.1-201ENST00000607459 531 ntBASIC16.21■□□□□ 0.19
MT-ND3P03897 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.21■□□□□ 0.19
MT-ND3P03897 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND3P03897 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MT-ND3P03897 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND3P03897 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 AC097376.2-205ENST00000610159 5334 ntBASIC16.21■□□□□ 0.19
MT-ND3P03897 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MT-ND3P03897 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
MT-ND3P03897 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND3P03897 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
MT-ND3P03897 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MT-ND3P03897 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
MT-ND3P03897 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.21■□□□□ 0.18
MT-ND3P03897 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND3P03897 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND3P03897 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND3P03897 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND3P03897 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND3P03897 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND3P03897 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND3P03897 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms