Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTPN18Q99952 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN18Q99952 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN18Q99952 ME2P1-201ENST00000426028 1970 ntBASIC17.88■□□□□ 0.45
PTPN18Q99952 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PTPN18Q99952 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN18Q99952 FAM8A4P-201ENST00000435433 1213 ntBASIC17.87■□□□□ 0.45
PTPN18Q99952 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN18Q99952 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN18Q99952 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.87■□□□□ 0.45
PTPN18Q99952 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PTPN18Q99952 AF254983.2-201ENST00000612331 135 ntBASIC17.87■□□□□ 0.45
PTPN18Q99952 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN18Q99952 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 HTR7P1-202ENST00000624664 4411 ntBASIC17.87■□□□□ 0.45
PTPN18Q99952 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN18Q99952 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN18Q99952 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 Z97180.1-201ENST00000445173 988 ntBASIC17.86■□□□□ 0.45
PTPN18Q99952 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPN18Q99952 AP003171.2-201ENST00000528208 925 ntBASIC17.86■□□□□ 0.45
PTPN18Q99952 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PTPN18Q99952 MIR4313-201ENST00000580760 101 ntBASIC17.86■□□□□ 0.45
PTPN18Q99952 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 AC073413.1-201ENST00000603927 732 ntBASIC17.86■□□□□ 0.45
PTPN18Q99952 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPN18Q99952 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN18Q99952 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN18Q99952 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN18Q99952 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 AC092171.3-201ENST00000610122 2651 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPN18Q99952 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN18Q99952 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 ACTG1P2-201ENST00000415776 1125 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 ACTG1P11-201ENST00000425411 1125 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 AC069218.1-201ENST00000435269 762 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN18Q99952 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN18Q99952 NUP210P1-202ENST00000504322 710 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 AC024681.1-201ENST00000521917 487 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms