Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AL138799.1-201ENST00000448213 1675 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 PDIA3P1-201ENST00000471856 1510 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AC134312.5-201ENST00000568031 1313 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 MSTO2P-201ENST00000314835 1709 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 RPS2P32-201ENST00000439199 892 ntBASIC18.8■□□□□ 0.6
PDS5AQ29RF7 KRT223P-202ENST00000449164 1292 ntBASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AC104989.1-201ENST00000519711 778 ntBASIC18.8■□□□□ 0.6
PDS5AQ29RF7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AP005019.2-201ENST00000615104 511 ntBASIC18.8■□□□□ 0.6
PDS5AQ29RF7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.8■□□□□ 0.6
PDS5AQ29RF7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDS5AQ29RF7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 BCRP2-202ENST00000447763 634 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AC106760.1-201ENST00000508690 800 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 BCRP6-201ENST00000510112 632 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 BCRP7-201ENST00000511549 544 ntBASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.78■□□□□ 0.6
PDS5AQ29RF7 AC133552.6-201ENST00000613406 534 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms