Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
CD47Q08722 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 AC011477.6-201ENST00000604980 1927 ntBASIC14.8□□□□□ -0.04
CD47Q08722 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.8□□□□□ -0.04
CD47Q08722 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 FAM185BP-201ENST00000443595 716 ntBASIC14.8□□□□□ -0.04
CD47Q08722 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 RNA5SP415-201ENST00000517246 115 ntBASIC14.8□□□□□ -0.04
CD47Q08722 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.8□□□□□ -0.04
CD47Q08722 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CD47Q08722 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
CD47Q08722 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD47Q08722 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD47Q08722 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 VN2R19P-201ENST00000442399 1052 ntBASIC14.79□□□□□ -0.04
CD47Q08722 AC009947.1-201ENST00000444350 727 ntBASIC14.79□□□□□ -0.04
CD47Q08722 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.79□□□□□ -0.04
CD47Q08722 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.79□□□□□ -0.04
CD47Q08722 RNA5SP419-201ENST00000515908 135 ntBASIC14.79□□□□□ -0.04
CD47Q08722 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CD47Q08722 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 MIR4515-201ENST00000584082 81 ntBASIC14.79□□□□□ -0.04
CD47Q08722 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.79□□□□□ -0.04
CD47Q08722 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.79□□□□□ -0.04
CD47Q08722 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD47Q08722 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD47Q08722 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms