Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.29■□□□□ 0.68
SCN7AQ01118 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 TPM3P8-201ENST00000330554 643 ntBASIC19.29■□□□□ 0.68
SCN7AQ01118 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCN7AQ01118 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCN7AQ01118 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCN7AQ01118 LINC02447-202ENST00000501888 2146 ntBASIC19.29■□□□□ 0.68
SCN7AQ01118 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCN7AQ01118 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN7AQ01118 NKILA-202ENST00000614771 2598 ntBASIC19.29■□□□□ 0.68
SCN7AQ01118 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN7AQ01118 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 PCDHA12-202ENST00000613593 2588 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 ELK2AP-201ENST00000392510 1007 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.28■□□□□ 0.68
SCN7AQ01118 ACTG1P2-201ENST00000415776 1125 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 ACTG1P11-201ENST00000425411 1125 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 AC079328.1-201ENST00000560358 952 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.28■□□□□ 0.68
SCN7AQ01118 AC007663.3-201ENST00000609632 465 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 AC244157.2-201ENST00000616239 1006 ntBASIC19.28■□□□□ 0.68
SCN7AQ01118 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN7AQ01118 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCN7AQ01118 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.28■□□□□ 0.68
SCN7AQ01118 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCN7AQ01118 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN7AQ01118 RN7SKP175-201ENST00000408472 289 ntBASIC19.27■□□□□ 0.68
SCN7AQ01118 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.27■□□□□ 0.68
SCN7AQ01118 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.27■□□□□ 0.68
SCN7AQ01118 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.27■□□□□ 0.68
SCN7AQ01118 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN7AQ01118 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 FGFR3P5-201ENST00000564496 886 ntBASIC19.27■□□□□ 0.68
SCN7AQ01118 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN7AQ01118 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 AC004466.1-201ENST00000599515 1080 ntBASIC19.27■□□□□ 0.68
SCN7AQ01118 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN7AQ01118 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN7AQ01118 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.27■□□□□ 0.68
SCN7AQ01118 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.27■□□□□ 0.68
SCN7AQ01118 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN7AQ01118 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCN7AQ01118 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN7AQ01118 AC055811.4-201ENST00000624039 1754 ntBASIC19.27■□□□□ 0.68
SCN7AQ01118 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SCN7AQ01118 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCN7AQ01118 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.27■□□□□ 0.67
SCN7AQ01118 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.27■□□□□ 0.67
SCN7AQ01118 FNTAP2-201ENST00000430308 634 ntBASIC19.27■□□□□ 0.67
SCN7AQ01118 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCN7AQ01118 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.27■□□□□ 0.67
SCN7AQ01118 DUX4L47-201ENST00000566374 394 ntBASIC19.27■□□□□ 0.67
SCN7AQ01118 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SCN7AQ01118 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.27■□□□□ 0.67
SCN7AQ01118 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SCN7AQ01118 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCN7AQ01118 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCN7AQ01118 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.27■□□□□ 0.67
SCN7AQ01118 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 CLUHP2-201ENST00000426660 1303 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms