Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.8■□□□□ 0.6
COL1A1P02452 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL1A1P02452 AC127383.1-201ENST00000444697 1800 ntBASIC18.79■□□□□ 0.6
COL1A1P02452 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.79■□□□□ 0.6
COL1A1P02452 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.79■□□□□ 0.6
COL1A1P02452 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL1A1P02452 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.79■□□□□ 0.6
COL1A1P02452 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.79■□□□□ 0.6
COL1A1P02452 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.79■□□□□ 0.6
COL1A1P02452 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL1A1P02452 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.79■□□□□ 0.6
COL1A1P02452 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.79■□□□□ 0.6
COL1A1P02452 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.79■□□□□ 0.6
COL1A1P02452 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL1A1P02452 AL138709.1-201ENST00000614840 1693 ntBASIC18.79■□□□□ 0.6
COL1A1P02452 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.78■□□□□ 0.6
COL1A1P02452 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.78■□□□□ 0.6
COL1A1P02452 AL590640.2-201ENST00000457038 527 ntBASIC18.78■□□□□ 0.6
COL1A1P02452 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.78■□□□□ 0.6
COL1A1P02452 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.78■□□□□ 0.6
COL1A1P02452 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL1A1P02452 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 AC084364.1-201ENST00000551967 1556 ntBASIC18.78■□□□□ 0.6
COL1A1P02452 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.78■□□□□ 0.6
COL1A1P02452 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.78■□□□□ 0.6
COL1A1P02452 AL138799.1-201ENST00000448213 1675 ntBASIC18.78■□□□□ 0.6
COL1A1P02452 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
COL1A1P02452 AC092127.1-201ENST00000567093 3455 ntBASIC18.78■□□□□ 0.6
COL1A1P02452 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL1A1P02452 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL1A1P02452 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL1A1P02452 GPAA1P2-201ENST00000417923 928 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 AC026954.1-201ENST00000429771 1293 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 AC006033.1-201ENST00000440505 426 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 FAM86HP-204ENST00000513466 959 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 RN7SL560P-201ENST00000577943 264 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL1A1P02452 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.77■□□□□ 0.6
COL1A1P02452 AC008687.7-202ENST00000637404 953 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
COL1A1P02452 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 AC026691.1-201ENST00000602502 2017 ntBASIC18.77■□□□□ 0.6
COL1A1P02452 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL1A1P02452 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
COL1A1P02452 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL1A1P02452 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL1A1P02452 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL1A1P02452 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
COL1A1P02452 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 AL139384.1-201ENST00000612143 3047 ntBASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms