Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC6Q9UBN7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDAC6Q9UBN7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
HDAC6Q9UBN7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDAC6Q9UBN7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDAC6Q9UBN7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AC011495.1-201ENST00000498085 584 ntBASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AL596087.1-201ENST00000400979 1969 ntBASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AL136982.4-201ENST00000437689 1740 ntBASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 U82695.1-201ENST00000635752 1889 ntBASIC17.95■□□□□ 0.46
HDAC6Q9UBN7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HDAC6Q9UBN7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms