Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 ELK2AP-201ENST00000392510 1007 ntBASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 CNN2P10-201ENST00000443067 918 ntBASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 ACTG1P17-201ENST00000558391 1119 ntBASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 ECM1P1-201ENST00000604092 1279 ntBASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRAMP1Q96RY5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 MIR663B-201ENST00000408361 115 ntBASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRAMP1Q96RY5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 AGGF1P2-201ENST00000426656 2106 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 AC020916.1-201ENST00000587762 1774 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 AC148477.4-201ENST00000613430 1793 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 TPM3P8-201ENST00000330554 643 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 FNTAP2-201ENST00000430308 634 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 AC025181.2-201ENST00000606994 802 ntBASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CRAMP1Q96RY5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 AC018735.1-201ENST00000437208 1502 ntBASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.11■□□□□ 0.65
CRAMP1Q96RY5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms