Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 KRT8P14-201ENST00000414254 1442 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 OR10B1P-201ENST00000601666 907 ntBASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
ALMS1Q8TCU4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 MIR6842-201ENST00000612539 65 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 UBALD1-205ENST00000590891 2641 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC011840.2-201ENST00000563063 1520 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC090164.2-201ENST00000611487 516 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC127024.7-201ENST00000625101 200 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC005915.1-201ENST00000624912 2018 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AR-207ENST00000612010 3896 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AC009779.1-201ENST00000551138 283 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 AL645608.8-201ENST00000606034 2086 ntBASIC10.4□□□□□ -0.74
ALMS1Q8TCU4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms