Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 AC011477.6-201ENST00000604980 1927 ntBASIC13.27□□□□□ -0.28
ZNF546Q86UE3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.27□□□□□ -0.28
ZNF546Q86UE3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 AC136759.1-202ENST00000530858 2194 ntBASIC13.27□□□□□ -0.28
ZNF546Q86UE3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
ZNF546Q86UE3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 AC027601.5-201ENST00000624065 2482 ntBASIC13.27□□□□□ -0.29
ZNF546Q86UE3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 AK4P3-201ENST00000418260 669 ntBASIC13.27□□□□□ -0.29
ZNF546Q86UE3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 AC011467.2-201ENST00000598425 242 ntBASIC13.27□□□□□ -0.29
ZNF546Q86UE3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 AC131009.4-201ENST00000624048 1740 ntBASIC13.27□□□□□ -0.29
ZNF546Q86UE3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 U82695.1-201ENST00000635752 1889 ntBASIC13.27□□□□□ -0.29
ZNF546Q86UE3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
ZNF546Q86UE3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 HAUS4P1-201ENST00000406739 1145 ntBASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AL845331.1-201ENST00000424978 1190 ntBASIC13.26□□□□□ -0.29
ZNF546Q86UE3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF546Q86UE3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms