Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 IQSEC3P1-201ENST00000538799 536 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PPY2P-201ENST00000582808 702 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 GMFG-209ENST00000600322 622 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC024681.1-201ENST00000521917 487 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AC243562.2-201ENST00000561247 970 ntBASIC10.83□□□□□ -0.68
CSMD3Q7Z407 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CSMD3Q7Z407 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 AP002490.2-201ENST00000524791 560 ntBASIC10.82□□□□□ -0.68
CSMD3Q7Z407 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms