Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.24□□□□□ -0.13
CLRN1P58418 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CLRN1P58418 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.24□□□□□ -0.13
CLRN1P58418 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CLRN1P58418 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.24□□□□□ -0.13
CLRN1P58418 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
CLRN1P58418 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
CLRN1P58418 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLRN1P58418 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLRN1P58418 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.24□□□□□ -0.13
CLRN1P58418 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CLRN1P58418 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 CYP4F24P-201ENST00000586049 1580 ntBASIC14.23□□□□□ -0.13
CLRN1P58418 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLRN1P58418 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.23□□□□□ -0.13
CLRN1P58418 AC254562.1-201ENST00000417586 456 ntBASIC14.23□□□□□ -0.13
CLRN1P58418 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.23□□□□□ -0.13
CLRN1P58418 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
CLRN1P58418 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.23□□□□□ -0.13
CLRN1P58418 AC093520.2-201ENST00000561830 333 ntBASIC14.23□□□□□ -0.13
CLRN1P58418 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.23□□□□□ -0.13
CLRN1P58418 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLRN1P58418 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLRN1P58418 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLRN1P58418 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 REXO1L1P-202ENST00000608646 1974 ntBASIC14.23□□□□□ -0.13
CLRN1P58418 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLRN1P58418 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLRN1P58418 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLRN1P58418 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.22□□□□□ -0.13
CLRN1P58418 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLRN1P58418 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLRN1P58418 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLRN1P58418 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLRN1P58418 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.22□□□□□ -0.13
CLRN1P58418 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.22□□□□□ -0.13
CLRN1P58418 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.22□□□□□ -0.13
CLRN1P58418 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.22□□□□□ -0.13
CLRN1P58418 CNN2P11-201ENST00000429351 262 ntBASIC14.22□□□□□ -0.13
CLRN1P58418 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.22□□□□□ -0.13
CLRN1P58418 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLRN1P58418 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.22□□□□□ -0.13
CLRN1P58418 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.22□□□□□ -0.13
CLRN1P58418 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.22□□□□□ -0.13
CLRN1P58418 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.22□□□□□ -0.13
CLRN1P58418 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.22□□□□□ -0.13
CLRN1P58418 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.22□□□□□ -0.13
CLRN1P58418 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.22□□□□□ -0.13
CLRN1P58418 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.22□□□□□ -0.13
CLRN1P58418 AL596442.2-201ENST00000610240 980 ntBASIC14.22□□□□□ -0.13
CLRN1P58418 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms