Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.83■□□□□ 0.29
CTNNA1P35221 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTNNA1P35221 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTNNA1P35221 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CTNNA1P35221 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.83■□□□□ 0.28
CTNNA1P35221 AC098859.1-201ENST00000502915 1238 ntBASIC16.83■□□□□ 0.28
CTNNA1P35221 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CTNNA1P35221 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.83■□□□□ 0.28
CTNNA1P35221 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.83■□□□□ 0.28
CTNNA1P35221 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 AC138035.3-201ENST00000622706 2791 ntBASIC16.83■□□□□ 0.28
CTNNA1P35221 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.83■□□□□ 0.28
CTNNA1P35221 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTNNA1P35221 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.82■□□□□ 0.28
CTNNA1P35221 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AC112191.1-201ENST00000523689 701 ntBASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CTNNA1P35221 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.82■□□□□ 0.28
CTNNA1P35221 RARRES2P8-201ENST00000566335 367 ntBASIC16.82■□□□□ 0.28
CTNNA1P35221 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 AL513190.1-201ENST00000621254 727 ntBASIC16.82■□□□□ 0.28
CTNNA1P35221 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.82■□□□□ 0.28
CTNNA1P35221 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CTNNA1P35221 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTNNA1P35221 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms