Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.61□□□□□ -0.07
SHC1P29353 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.61□□□□□ -0.07
SHC1P29353 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.61□□□□□ -0.07
SHC1P29353 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 AC069262.1-201ENST00000539058 672 ntBASIC14.61□□□□□ -0.07
SHC1P29353 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.61□□□□□ -0.07
SHC1P29353 AL512356.2-201ENST00000546955 174 ntBASIC14.61□□□□□ -0.07
SHC1P29353 BANF1P1-201ENST00000553684 263 ntBASIC14.61□□□□□ -0.07
SHC1P29353 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.61□□□□□ -0.07
SHC1P29353 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 AC003101.2-201ENST00000612557 442 ntBASIC14.61□□□□□ -0.07
SHC1P29353 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.61□□□□□ -0.07
SHC1P29353 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.61□□□□□ -0.07
SHC1P29353 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.61□□□□□ -0.07
SHC1P29353 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SHC1P29353 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SHC1P29353 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.6□□□□□ -0.07
SHC1P29353 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 AL365330.1-201ENST00000607459 531 ntBASIC14.6□□□□□ -0.07
SHC1P29353 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 AC006058.4-201ENST00000624016 1670 ntBASIC14.6□□□□□ -0.07
SHC1P29353 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SHC1P29353 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
SHC1P29353 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SHC1P29353 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SHC1P29353 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHC1P29353 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHC1P29353 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms