Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.3■□□□□ 0.36
RFX1P22670 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.3■□□□□ 0.36
RFX1P22670 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX1P22670 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.3■□□□□ 0.36
RFX1P22670 MIR4453-201ENST00000584019 89 ntBASIC17.3■□□□□ 0.36
RFX1P22670 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX1P22670 AC026979.3-201ENST00000607315 403 ntBASIC17.3■□□□□ 0.36
RFX1P22670 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX1P22670 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 AC104640.1-201ENST00000562617 2109 ntBASIC17.3■□□□□ 0.36
RFX1P22670 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX1P22670 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX1P22670 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.29■□□□□ 0.36
RFX1P22670 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX1P22670 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.29■□□□□ 0.36
RFX1P22670 RN7SL371P-201ENST00000578099 267 ntBASIC17.29■□□□□ 0.36
RFX1P22670 SPDYE22P-201ENST00000582158 798 ntBASIC17.29■□□□□ 0.36
RFX1P22670 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX1P22670 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 AC020658.6-201ENST00000623564 1870 ntBASIC17.29■□□□□ 0.36
RFX1P22670 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX1P22670 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX1P22670 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX1P22670 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX1P22670 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 AC092384.3-202ENST00000564646 2873 ntBASIC17.28■□□□□ 0.36
RFX1P22670 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 COX5BP8-201ENST00000416911 349 ntBASIC17.28■□□□□ 0.36
RFX1P22670 EEF1DP4-201ENST00000446006 880 ntBASIC17.28■□□□□ 0.36
RFX1P22670 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.28■□□□□ 0.36
RFX1P22670 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX1P22670 IGHV3-71-201ENST00000523324 359 ntBASIC17.28■□□□□ 0.36
RFX1P22670 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.28■□□□□ 0.36
RFX1P22670 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX1P22670 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX1P22670 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 CU639417.3-201ENST00000624240 1404 ntBASIC17.28■□□□□ 0.36
RFX1P22670 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 PKD1P5-201ENST00000532415 10291 ntBASIC17.28■□□□□ 0.36
RFX1P22670 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX1P22670 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX1P22670 BNIP3P1-202ENST00000550043 1585 ntBASIC17.28■□□□□ 0.36
RFX1P22670 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX1P22670 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RFX1P22670 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms