Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
Q9Y3F1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Q9Y3F1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 AL645937.2-201ENST00000396808 931 ntBASIC17.34■□□□□ 0.37
Q9Y3F1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.34■□□□□ 0.37
Q9Y3F1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.34■□□□□ 0.37
Q9Y3F1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.34■□□□□ 0.37
Q9Y3F1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.34■□□□□ 0.37
Q9Y3F1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Q9Y3F1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.34■□□□□ 0.37
Q9Y3F1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9Y3F1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9Y3F1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Q9Y3F1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.33■□□□□ 0.37
Q9Y3F1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.33■□□□□ 0.37
Q9Y3F1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
Q9Y3F1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 MTHFR-217ENST00000641820 1569 ntBASIC17.33■□□□□ 0.37
Q9Y3F1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9Y3F1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Q9Y3F1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.33■□□□□ 0.36
Q9Y3F1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 MIR1202-201ENST00000408529 83 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.33■□□□□ 0.36
Q9Y3F1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Q9Y3F1 HOMER2P2-201ENST00000451621 847 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.33■□□□□ 0.36
Q9Y3F1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.33■□□□□ 0.36
Q9Y3F1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Q9Y3F1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.33■□□□□ 0.36
Q9Y3F1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.33■□□□□ 0.36
Q9Y3F1 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.33■□□□□ 0.36
Q9Y3F1 AC025181.2-201ENST00000606994 802 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.33■□□□□ 0.36
Q9Y3F1 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 AC068587.10-201ENST00000641210 219 ntBASIC17.33■□□□□ 0.36
Q9Y3F1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Q9Y3F1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.33■□□□□ 0.36
Q9Y3F1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9Y3F1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.32■□□□□ 0.36
Q9Y3F1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 AC015818.8-201ENST00000587907 1519 ntBASIC17.32■□□□□ 0.36
Q9Y3F1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Q9Y3F1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Q9Y3F1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.32■□□□□ 0.36
Q9Y3F1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Q9Y3F1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Q9Y3F1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Q9Y3F1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.32■□□□□ 0.36
Q9Y3F1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.32■□□□□ 0.36
Q9Y3F1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.32■□□□□ 0.36
Q9Y3F1 AC104306.2-201ENST00000451877 341 ntBASIC17.32■□□□□ 0.36
Q9Y3F1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.32■□□□□ 0.36
Q9Y3F1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
Q9Y3F1 EEF1DP1-201ENST00000585891 896 ntBASIC17.32■□□□□ 0.36
Q9Y3F1 AL008638.5-201ENST00000623814 1298 ntBASIC17.32■□□□□ 0.36
Q9Y3F1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Q9Y3F1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9Y3F1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Q9Y3F1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms