Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS9D1Q9Y2B5 AL035456.1-201ENST00000456064 1369 ntBASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC254562.1-201ENST00000417586 456 ntBASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC023141.5-201ENST00000458585 616 ntBASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 AC027348.2-201ENST00000624375 642 ntBASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS9D1Q9Y2B5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SPDYE7P-202ENST00000420373 878 ntBASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 RBPMS2P1-201ENST00000437762 623 ntBASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 PHKG1P2-201ENST00000457537 863 ntBASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 AC022960.2-201ENST00000616300 666 ntBASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 AC133485.6-201ENST00000624045 688 ntBASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS9D1Q9Y2B5 MIR600HG-201ENST00000449175 5984 ntBASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS9D1Q9Y2B5 AC020658.6-201ENST00000623564 1870 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms