Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MIR6080-201ENST00000617359 66 ntBASIC13.18□□□□□ -0.3
CALYQ9NYX4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.18□□□□□ -0.3
CALYQ9NYX4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AL596442.2-201ENST00000610240 980 ntBASIC13.17□□□□□ -0.3
CALYQ9NYX4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AC007967.4-201ENST00000614700 386 ntBASIC13.17□□□□□ -0.3
CALYQ9NYX4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AC092850.2-201ENST00000623821 2697 ntBASIC13.17□□□□□ -0.3
CALYQ9NYX4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CALYQ9NYX4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CALYQ9NYX4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 MIR1233-2-201ENST00000408138 82 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 MIR1233-1-201ENST00000408722 82 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 SPDYE7P-202ENST00000420373 878 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 PHKG1P2-201ENST00000457537 863 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 BANF1P1-201ENST00000553684 263 ntBASIC13.16□□□□□ -0.3
CALYQ9NYX4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CALYQ9NYX4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.16□□□□□ -0.3
CALYQ9NYX4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms