Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chaf1bQ9D0N7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.06□□□□□ -0.48
Chaf1bQ9D0N7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chaf1bQ9D0N7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms