Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 AC020907.1-201ENST00000616460 1350 ntBASIC18.58■□□□□ 0.57
TRIM47Q96LD4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 AC005052.1-201ENST00000625181 2492 ntBASIC18.58■□□□□ 0.57
TRIM47Q96LD4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM47Q96LD4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AC026691.1-201ENST00000602502 2017 ntBASIC18.58■□□□□ 0.56
TRIM47Q96LD4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AC233724.13-201ENST00000598383 410 ntBASIC18.58■□□□□ 0.56
TRIM47Q96LD4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AL139011.1-202ENST00000642063 584 ntBASIC18.58■□□□□ 0.56
TRIM47Q96LD4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TRIM47Q96LD4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AL391005.1-201ENST00000623953 2435 ntBASIC18.57■□□□□ 0.56
TRIM47Q96LD4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 RARRES2P5-201ENST00000564013 466 ntBASIC18.57■□□□□ 0.56
TRIM47Q96LD4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC074044.1-201ENST00000609673 707 ntBASIC18.57■□□□□ 0.56
TRIM47Q96LD4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.57■□□□□ 0.56
TRIM47Q96LD4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM47Q96LD4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 LINC02199-201ENST00000506655 2702 ntBASIC18.56■□□□□ 0.56
TRIM47Q96LD4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 AC099336.1-201ENST00000417053 1171 ntBASIC18.56■□□□□ 0.56
TRIM47Q96LD4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms