Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.67■□□□□ 0.1
PKNOX1P55347 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKNOX1P55347 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.67■□□□□ 0.1
PKNOX1P55347 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PKNOX1P55347 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PKNOX1P55347 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 TMBIM7P-203ENST00000641617 1718 ntBASIC15.66■□□□□ 0.1
PKNOX1P55347 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.66■□□□□ 0.1
PKNOX1P55347 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 KRT18P2-201ENST00000447938 1258 ntBASIC15.66■□□□□ 0.1
PKNOX1P55347 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 AC112191.1-201ENST00000523689 701 ntBASIC15.66■□□□□ 0.1
PKNOX1P55347 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.66■□□□□ 0.1
PKNOX1P55347 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 AP002472.1-201ENST00000577490 586 ntBASIC15.66■□□□□ 0.1
PKNOX1P55347 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 AC073389.1-201ENST00000595595 795 ntBASIC15.66■□□□□ 0.1
PKNOX1P55347 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PKNOX1P55347 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PKNOX1P55347 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKNOX1P55347 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 AC023908.3-201ENST00000564211 3047 ntBASIC15.65■□□□□ 0.1
PKNOX1P55347 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 AC007967.2-201ENST00000432613 625 ntBASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 AC098859.1-201ENST00000502915 1238 ntBASIC15.65■□□□□ 0.1
PKNOX1P55347 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PKNOX1P55347 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PKNOX1P55347 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKNOX1P55347 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PKNOX1P55347 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PKNOX1P55347 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PKNOX1P55347 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PKNOX1P55347 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PKNOX1P55347 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.64■□□□□ 0.09
PKNOX1P55347 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms