Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MSR1P21757 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.09□□□□□ -0.15
MSR1P21757 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
MSR1P21757 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.09□□□□□ -0.15
MSR1P21757 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 AC254562.1-201ENST00000417586 456 ntBASIC14.09□□□□□ -0.15
MSR1P21757 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.09□□□□□ -0.15
MSR1P21757 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.09□□□□□ -0.15
MSR1P21757 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.09□□□□□ -0.15
MSR1P21757 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.09□□□□□ -0.15
MSR1P21757 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
MSR1P21757 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MSR1P21757 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.09□□□□□ -0.15
MSR1P21757 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.09□□□□□ -0.15
MSR1P21757 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MSR1P21757 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.15
MSR1P21757 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.08□□□□□ -0.15
MSR1P21757 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
MSR1P21757 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MSR1P21757 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
MSR1P21757 KRT8P37-201ENST00000451609 1420 ntBASIC14.08□□□□□ -0.15
MSR1P21757 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MSR1P21757 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.08□□□□□ -0.16
MSR1P21757 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.08□□□□□ -0.16
MSR1P21757 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 KRT18P13-201ENST00000400056 1290 ntBASIC14.08□□□□□ -0.16
MSR1P21757 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.08□□□□□ -0.16
MSR1P21757 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.08□□□□□ -0.16
MSR1P21757 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 AP006288.1-201ENST00000446065 395 ntBASIC14.08□□□□□ -0.16
MSR1P21757 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.08□□□□□ -0.16
MSR1P21757 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.08□□□□□ -0.16
MSR1P21757 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.08□□□□□ -0.16
MSR1P21757 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.08□□□□□ -0.16
MSR1P21757 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.08□□□□□ -0.16
MSR1P21757 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.08□□□□□ -0.16
MSR1P21757 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MSR1P21757 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms