Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 POU5F1P6-201ENST00000466990 990 ntBASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 MIR4754-201ENST00000582477 89 ntBASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 AC074138.1-201ENST00000611182 1303 ntBASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM88BA6NKF7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AL139008.1-201ENST00000437894 228 ntBASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PUDPP3-201ENST00000445368 636 ntBASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PIN4P1-201ENST00000451079 396 ntBASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AL391280.1-201ENST00000506969 1062 ntBASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AL031713.1-201ENST00000564813 661 ntBASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM88BA6NKF7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 RN7SKP214-201ENST00000364208 315 ntBASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 AL022344.2-201ENST00000568976 968 ntBASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM88BA6NKF7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms