Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 AC123567.1-201ENST00000548294 1261 ntBASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 FLJ38576-201ENST00000623820 2459 ntBASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SSX2IPQ9Y2D8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AL603756.1-201ENST00000606511 2163 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC007274.1-201ENST00000439805 662 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 POU5F1P6-201ENST00000466990 990 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC104596.2-201ENST00000512793 793 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC023310.3-201ENST00000557027 670 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC100756.1-201ENST00000562736 682 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC138749.3-201ENST00000567691 622 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC116165.1-201ENST00000611806 668 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 AC004790.1-201ENST00000612686 536 ntBASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX2IPQ9Y2D8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 AC132938.2-201ENST00000579188 680 ntBASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 AL591163.1-201ENST00000641757 987 ntBASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 CYP4F24P-201ENST00000586049 1580 ntBASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms