Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC025279.2-201ENST00000569730 653 ntBASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC008687.7-202ENST00000637404 953 ntBASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC026471.1-201ENST00000564629 3026 ntBASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 AC020907.1-201ENST00000616460 1350 ntBASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRC3BQ96PB8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC3BQ96PB8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 AC010328.2-201ENST00000597698 1111 ntBASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRRC3BQ96PB8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 YBX1P6-201ENST00000442962 1002 ntBASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 DUX4L45-201ENST00000566406 1057 ntBASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AC244093.1-201ENST00000610837 814 ntBASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AL133338.1-201ENST00000565695 1517 ntBASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 AL138709.1-201ENST00000614840 1693 ntBASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms