Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm14723-201ENSMUST00000118686 215 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm11793-201ENSMUST00000120433 981 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm12363-201ENSMUST00000122250 668 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gm38266-201ENSMUST00000194931 421 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm11591-201ENSMUST00000120063 702 ntBASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm11978-201ENSMUST00000122315 466 ntBASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm4768-201ENSMUST00000206199 686 ntBASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm18935-201ENSMUST00000212692 664 ntBASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndc1Q8VCB1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm7809-201ENSMUST00000153199 742 ntBASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms