Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 FNTAP2-201ENST00000430308 634 ntBASIC19.05■□□□□ 0.64
SNED1Q8TER0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AP003171.2-201ENST00000528208 925 ntBASIC19.05■□□□□ 0.64
SNED1Q8TER0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.05■□□□□ 0.64
SNED1Q8TER0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNED1Q8TER0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.05■□□□□ 0.64
SNED1Q8TER0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 AC016700.1-201ENST00000429424 312 ntBASIC19.04■□□□□ 0.64
SNED1Q8TER0 POM121L10P-201ENST00000436994 1285 ntBASIC19.04■□□□□ 0.64
SNED1Q8TER0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 UPF3AP2-201ENST00000457924 1132 ntBASIC19.04■□□□□ 0.64
SNED1Q8TER0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 RN7SL48P-201ENST00000579283 293 ntBASIC19.04■□□□□ 0.64
SNED1Q8TER0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNED1Q8TER0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNED1Q8TER0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 AL662890.1-201ENST00000396818 632 ntBASIC19.03■□□□□ 0.64
SNED1Q8TER0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 KLF2P2-201ENST00000416807 1039 ntBASIC19.03■□□□□ 0.64
SNED1Q8TER0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 MIR4722-201ENST00000578292 60 ntBASIC19.03■□□□□ 0.64
SNED1Q8TER0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 AC097724.1-201ENST00000609581 426 ntBASIC19.03■□□□□ 0.64
SNED1Q8TER0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 AC148477.4-201ENST00000613430 1793 ntBASIC19.03■□□□□ 0.64
SNED1Q8TER0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.03■□□□□ 0.64
SNED1Q8TER0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNED1Q8TER0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNED1Q8TER0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNED1Q8TER0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNED1Q8TER0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.02■□□□□ 0.64
SNED1Q8TER0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.02■□□□□ 0.64
SNED1Q8TER0 AC091812.3-201ENST00000621362 345 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms