Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS8Q8N3P4 MSTO2P-201ENST00000314835 1709 ntBASIC24.5■■□□□ 1.51
VPS8Q8N3P4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 AC106886.1-201ENST00000568660 600 ntBASIC24.49■■□□□ 1.51
VPS8Q8N3P4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 AC092850.2-201ENST00000623821 2697 ntBASIC24.49■■□□□ 1.51
VPS8Q8N3P4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS8Q8N3P4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 AC068587.3-201ENST00000526613 355 ntBASIC24.48■■□□□ 1.51
VPS8Q8N3P4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 GNRHR2-203ENST00000581100 1187 ntBASIC24.48■■□□□ 1.51
VPS8Q8N3P4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 AC093813.1-201ENST00000605066 256 ntBASIC24.48■■□□□ 1.51
VPS8Q8N3P4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS8Q8N3P4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC24.47■■□□□ 1.51
VPS8Q8N3P4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms