Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 DUX4L47-201ENST00000566374 394 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC244157.2-201ENST00000616239 1006 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CLUHP2-201ENST00000426660 1303 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 TPM3P8-201ENST00000330554 643 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CEP164P1-201ENST00000455142 418 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC006480.2-201ENST00000609770 1337 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC073352.2-201ENST00000609385 439 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC004923.1-202ENST00000642106 209 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 GHSR-202ENST00000427970 912 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 KRT18P25-201ENST00000508931 1278 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 FTLP1-201ENST00000449155 526 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 MESTP3-201ENST00000503460 968 ntBASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13DQ5THJ4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13DQ5THJ4 AL158070.2-201ENST00000623713 1621 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms