Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.54■□□□□ 0.4
GPC3P51654 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.54■□□□□ 0.4
GPC3P51654 CDC14C-201ENST00000428251 1719 ntBASIC17.54■□□□□ 0.4
GPC3P51654 AC069224.1-201ENST00000566372 1715 ntBASIC17.54■□□□□ 0.4
GPC3P51654 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GPC3P51654 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.54■□□□□ 0.4
GPC3P51654 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.54■□□□□ 0.4
GPC3P51654 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC3P51654 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
GPC3P51654 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC3P51654 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC3P51654 AP006294.1-201ENST00000415407 339 ntBASIC17.53■□□□□ 0.4
GPC3P51654 AC098850.1-201ENST00000419919 790 ntBASIC17.53■□□□□ 0.4
GPC3P51654 RPL13P2-201ENST00000440687 659 ntBASIC17.53■□□□□ 0.4
GPC3P51654 TARDBPP1-201ENST00000442013 1203 ntBASIC17.53■□□□□ 0.4
GPC3P51654 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC3P51654 MYCLP2-201ENST00000449268 967 ntBASIC17.53■□□□□ 0.4
GPC3P51654 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 AC123567.1-201ENST00000548294 1261 ntBASIC17.53■□□□□ 0.4
GPC3P51654 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
GPC3P51654 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.53■□□□□ 0.4
GPC3P51654 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 AL139384.1-201ENST00000612143 3047 ntBASIC17.53■□□□□ 0.4
GPC3P51654 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC3P51654 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GPC3P51654 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC3P51654 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC3P51654 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC3P51654 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
GPC3P51654 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GPC3P51654 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
GPC3P51654 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.52■□□□□ 0.4
GPC3P51654 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 AC112504.1-201ENST00000623415 1841 ntBASIC17.52■□□□□ 0.4
GPC3P51654 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 KRT17P7-201ENST00000451704 1104 ntBASIC17.52■□□□□ 0.4
GPC3P51654 ELK1P1-201ENST00000485699 580 ntBASIC17.52■□□□□ 0.4
GPC3P51654 LINC02447-202ENST00000501888 2146 ntBASIC17.52■□□□□ 0.4
GPC3P51654 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.52■□□□□ 0.4
GPC3P51654 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.52■□□□□ 0.4
GPC3P51654 RARRES2P5-201ENST00000564013 466 ntBASIC17.52■□□□□ 0.4
GPC3P51654 RRP7BP-205ENST00000566851 833 ntBASIC17.52■□□□□ 0.4
GPC3P51654 AC093726.1-201ENST00000608064 963 ntBASIC17.52■□□□□ 0.4
GPC3P51654 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
GPC3P51654 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GPC3P51654 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC3P51654 LINC02199-201ENST00000506655 2702 ntBASIC17.52■□□□□ 0.39
GPC3P51654 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.52■□□□□ 0.39
GPC3P51654 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
GPC3P51654 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
GPC3P51654 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
GPC3P51654 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC3P51654 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
GPC3P51654 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms