Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RCC2P8-201ENST00000502779 1035 ntBASIC27.32■■□□□ 1.96
NCAPD3P42695 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
NCAPD3P42695 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NCAPD3P42695 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NCAPD3P42695 AL136295.7-201ENST00000619226 1200 ntBASIC27.32■■□□□ 1.96
NCAPD3P42695 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC27.32■■□□□ 1.96
NCAPD3P42695 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 AC120498.9-201ENST00000339021 3867 ntBASIC27.31■■□□□ 1.96
NCAPD3P42695 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC27.31■■□□□ 1.96
NCAPD3P42695 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC27.31■■□□□ 1.96
NCAPD3P42695 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
NCAPD3P42695 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
NCAPD3P42695 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 HLA-J-204ENST00000495278 958 ntBASIC27.31■■□□□ 1.96
NCAPD3P42695 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC27.31■■□□□ 1.96
NCAPD3P42695 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC27.31■■□□□ 1.96
NCAPD3P42695 HNRNPA1P36-201ENST00000521313 955 ntBASIC27.31■■□□□ 1.96
NCAPD3P42695 PAM16-211ENST00000575848 518 ntTSL 3 BASIC27.31■■□□□ 1.96
NCAPD3P42695 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
NCAPD3P42695 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC27.31■■□□□ 1.96
NCAPD3P42695 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NCAPD3P42695 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC27.3■■□□□ 1.96
NCAPD3P42695 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 CYP51A1P3-201ENST00000400072 1428 ntBASIC27.3■■□□□ 1.96
NCAPD3P42695 TBC1D3J-201ENST00000620719 1426 ntBASIC27.3■■□□□ 1.96
NCAPD3P42695 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
NCAPD3P42695 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC27.3■■□□□ 1.96
NCAPD3P42695 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NCAPD3P42695 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC27.3■■□□□ 1.96
NCAPD3P42695 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC27.3■■□□□ 1.96
NCAPD3P42695 IRF3-215ENST00000596822 823 ntTSL 3 BASIC27.3■■□□□ 1.96
NCAPD3P42695 AC009084.3-201ENST00000623356 437 ntBASIC27.3■■□□□ 1.96
NCAPD3P42695 AL645728.2-202ENST00000641679 227 ntBASIC27.3■■□□□ 1.96
NCAPD3P42695 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
NCAPD3P42695 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
NCAPD3P42695 MIR1227-201ENST00000408484 88 ntBASIC27.29■■□□□ 1.96
NCAPD3P42695 AC010141.1-201ENST00000411585 623 ntBASIC27.29■■□□□ 1.96
NCAPD3P42695 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC27.29■■□□□ 1.96
NCAPD3P42695 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC27.29■■□□□ 1.96
NCAPD3P42695 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 STUB1-204ENST00000564370 875 ntTSL 2 BASIC27.29■■□□□ 1.96
NCAPD3P42695 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC27.29■■□□□ 1.96
NCAPD3P42695 AC004466.1-201ENST00000599515 1080 ntBASIC27.29■■□□□ 1.96
NCAPD3P42695 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC27.29■■□□□ 1.96
NCAPD3P42695 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
NCAPD3P42695 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
NCAPD3P42695 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 ME2P1-201ENST00000426028 1970 ntBASIC27.28■■□□□ 1.96
NCAPD3P42695 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC27.28■■□□□ 1.96
NCAPD3P42695 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC27.28■■□□□ 1.96
NCAPD3P42695 AC004066.1-201ENST00000502488 802 ntBASIC27.28■■□□□ 1.96
NCAPD3P42695 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC27.28■■□□□ 1.96
NCAPD3P42695 DUX4L47-201ENST00000566374 394 ntBASIC27.28■■□□□ 1.96
NCAPD3P42695 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC27.28■■□□□ 1.96
NCAPD3P42695 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC27.28■■□□□ 1.96
NCAPD3P42695 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
NCAPD3P42695 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
NCAPD3P42695 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 BANP-227ENST00000626016 2144 ntTSL 2 BASIC27.28■■□□□ 1.96
NCAPD3P42695 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NCAPD3P42695 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC27.27■■□□□ 1.96
NCAPD3P42695 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 RN7SKP175-201ENST00000408472 289 ntBASIC27.27■■□□□ 1.96
NCAPD3P42695 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC27.27■■□□□ 1.96
NCAPD3P42695 AC022616.1-201ENST00000518688 554 ntBASIC27.27■■□□□ 1.96
NCAPD3P42695 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC27.27■■□□□ 1.96
NCAPD3P42695 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC27.27■■□□□ 1.96
NCAPD3P42695 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NCAPD3P42695 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
NCAPD3P42695 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms