Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
COL5A1P20908 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.99□□□□□ -0.01
COL5A1P20908 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.99□□□□□ -0.01
COL5A1P20908 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL5A1P20908 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.99□□□□□ -0.01
COL5A1P20908 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 CD8B2-202ENST00000417670 633 ntBASIC14.99□□□□□ -0.01
COL5A1P20908 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.99□□□□□ -0.01
COL5A1P20908 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.99□□□□□ -0.01
COL5A1P20908 ECM1P1-201ENST00000604092 1279 ntBASIC14.99□□□□□ -0.01
COL5A1P20908 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.99□□□□□ -0.01
COL5A1P20908 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.99□□□□□ -0.01
COL5A1P20908 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.98□□□□□ -0.01
COL5A1P20908 AC099398.1-201ENST00000567919 2776 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.98□□□□□ -0.01
COL5A1P20908 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.98□□□□□ -0.01
COL5A1P20908 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
COL5A1P20908 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
COL5A1P20908 POM121L10P-201ENST00000436994 1285 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 BX284668.4-201ENST00000453917 508 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.98□□□□□ -0.01
COL5A1P20908 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
COL5A1P20908 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.98□□□□□ -0.01
COL5A1P20908 MIR3619-201ENST00000579667 83 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 NDUFV2P1-201ENST00000596415 907 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 BX539320.1-201ENST00000623759 877 ntBASIC14.98□□□□□ -0.01
COL5A1P20908 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.98□□□□□ -0.01
COL5A1P20908 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.98□□□□□ -0.01
COL5A1P20908 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL5A1P20908 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.98□□□□□ -0.01
COL5A1P20908 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
COL5A1P20908 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.97□□□□□ -0.01
COL5A1P20908 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.97□□□□□ -0.01
COL5A1P20908 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.97□□□□□ -0.01
COL5A1P20908 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.97□□□□□ -0.01
COL5A1P20908 CHMP4BP1-201ENST00000556017 588 ntBASIC14.97□□□□□ -0.01
COL5A1P20908 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
COL5A1P20908 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 AC018735.1-201ENST00000437208 1502 ntBASIC14.97□□□□□ -0.01
COL5A1P20908 AC015818.8-201ENST00000587907 1519 ntBASIC14.97□□□□□ -0.01
COL5A1P20908 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL5A1P20908 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 AC024909.3-201ENST00000611513 2257 ntBASIC14.97□□□□□ -0.01
COL5A1P20908 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
COL5A1P20908 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.97□□□□□ -0.01
COL5A1P20908 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL5A1P20908 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL5A1P20908 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms