Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PTPN1P18031 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PTPN1P18031 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN1P18031 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 AL035633.1-201ENST00000406139 838 ntBASIC16.83■□□□□ 0.28
PTPN1P18031 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN1P18031 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN1P18031 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN1P18031 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTPN1P18031 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
PTPN1P18031 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN1P18031 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PTPN1P18031 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
PTPN1P18031 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN1P18031 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN1P18031 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 PCDHA1-201ENST00000378133 2726 ntBASIC16.82■□□□□ 0.28
PTPN1P18031 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN1P18031 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN1P18031 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 MEIS3P1-201ENST00000495167 958 ntBASIC16.82■□□□□ 0.28
PTPN1P18031 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN1P18031 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN1P18031 MIR4313-201ENST00000580760 101 ntBASIC16.82■□□□□ 0.28
PTPN1P18031 AL132655.2-201ENST00000596276 594 ntBASIC16.82■□□□□ 0.28
PTPN1P18031 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPN1P18031 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPN1P18031 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN1P18031 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PTPN1P18031 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTPN1P18031 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.81■□□□□ 0.28
PTPN1P18031 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 KRT18P64-201ENST00000434946 1219 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 COX20P2-201ENST00000452636 358 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms