Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC007274.1-201ENST00000439805 662 ntBASIC17.81■□□□□ 0.44
GGPS1O95749 SLED1-202ENST00000512051 380 ntBASIC17.81■□□□□ 0.44
GGPS1O95749 KRT17P8-201ENST00000540749 863 ntBASIC17.81■□□□□ 0.44
GGPS1O95749 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.81■□□□□ 0.44
GGPS1O95749 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.81■□□□□ 0.44
GGPS1O95749 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.81■□□□□ 0.44
GGPS1O95749 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
GGPS1O95749 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.81■□□□□ 0.44
GGPS1O95749 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.8■□□□□ 0.44
GGPS1O95749 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
GGPS1O95749 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GGPS1O95749 TOMM22P5-201ENST00000416399 439 ntBASIC17.8■□□□□ 0.44
GGPS1O95749 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.8■□□□□ 0.44
GGPS1O95749 AC007389.4-201ENST00000454674 793 ntBASIC17.8■□□□□ 0.44
GGPS1O95749 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.8■□□□□ 0.44
GGPS1O95749 ACA64.2-201ENST00000459014 129 ntBASIC17.8■□□□□ 0.44
GGPS1O95749 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.8■□□□□ 0.44
GGPS1O95749 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
GGPS1O95749 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GGPS1O95749 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 AL662844.4-201ENST00000606367 2838 ntBASIC17.8■□□□□ 0.44
GGPS1O95749 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.8■□□□□ 0.44
GGPS1O95749 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GGPS1O95749 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 AC046158.3-201ENST00000624947 2558 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
GGPS1O95749 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 MIR648-201ENST00000385046 94 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 FAM86LP-201ENST00000478302 853 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 AC106886.1-201ENST00000568660 600 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.79■□□□□ 0.44
GGPS1O95749 AC097359.3-201ENST00000603982 1210 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 AC022188.1-201ENST00000620960 1664 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms