Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 AC127383.1-201ENST00000444697 1800 ntBASIC14.66□□□□□ -0.06
NKX2-2O95096 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-2O95096 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-2O95096 TARDBPP1-201ENST00000442013 1203 ntBASIC14.66□□□□□ -0.06
NKX2-2O95096 FAM86GP-201ENST00000448322 971 ntBASIC14.66□□□□□ -0.06
NKX2-2O95096 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-2O95096 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-2O95096 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 AC092384.3-202ENST00000564646 2873 ntBASIC14.66□□□□□ -0.06
NKX2-2O95096 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-2O95096 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-2O95096 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-2O95096 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC087481.3-201ENST00000602886 1894 ntBASIC14.65□□□□□ -0.06
NKX2-2O95096 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-2O95096 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX2-2O95096 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX2-2O95096 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-2O95096 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC025048.3-201ENST00000590609 569 ntBASIC14.65□□□□□ -0.06
NKX2-2O95096 AL158211.3-201ENST00000607385 239 ntBASIC14.65□□□□□ -0.06
NKX2-2O95096 AC005702.4-201ENST00000618393 416 ntBASIC14.65□□□□□ -0.06
NKX2-2O95096 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.65□□□□□ -0.06
NKX2-2O95096 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-2O95096 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-2O95096 AC136621.1-201ENST00000624017 2304 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms