Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 FTH1P14-201ENST00000482930 551 ntBASIC20.22■□□□□ 0.83
KCNQ3O43525 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.22■□□□□ 0.83
KCNQ3O43525 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNQ3O43525 AC107373.2-201ENST00000607735 490 ntBASIC20.22■□□□□ 0.83
KCNQ3O43525 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 AC024909.3-201ENST00000611513 2257 ntBASIC20.22■□□□□ 0.83
KCNQ3O43525 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNQ3O43525 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KCNQ3O43525 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 BAATP1-201ENST00000412284 1225 ntBASIC20.21■□□□□ 0.83
KCNQ3O43525 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.21■□□□□ 0.83
KCNQ3O43525 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 GAPDHP40-201ENST00000505218 1006 ntBASIC20.21■□□□□ 0.83
KCNQ3O43525 PTP4A1P2-201ENST00000546033 454 ntBASIC20.21■□□□□ 0.83
KCNQ3O43525 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNQ3O43525 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KCNQ3O43525 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNQ3O43525 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNQ3O43525 PCDHB19P-201ENST00000570871 2371 ntBASIC20.21■□□□□ 0.83
KCNQ3O43525 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KCNQ3O43525 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNQ3O43525 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
KCNQ3O43525 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KCNQ3O43525 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ3O43525 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KCNQ3O43525 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 AC005229.1-201ENST00000392885 409 ntBASIC20.2■□□□□ 0.82
KCNQ3O43525 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ3O43525 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.2■□□□□ 0.82
KCNQ3O43525 GNRHR2-203ENST00000581100 1187 ntBASIC20.2■□□□□ 0.82
KCNQ3O43525 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
KCNQ3O43525 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 AL022328.1-201ENST00000610050 478 ntBASIC20.2■□□□□ 0.82
KCNQ3O43525 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 AC134312.5-201ENST00000568031 1313 ntBASIC20.2■□□□□ 0.82
KCNQ3O43525 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ3O43525 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 AL603832.2-201ENST00000566195 2125 ntBASIC20.2■□□□□ 0.82
KCNQ3O43525 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ3O43525 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ3O43525 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ3O43525 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ3O43525 AC099398.1-201ENST00000567919 2776 ntBASIC20.19■□□□□ 0.82
KCNQ3O43525 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ3O43525 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms