Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AL035456.1-201ENST00000456064 1369 ntBASIC15.98■□□□□ 0.15
CFAP99D6REC4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP99D6REC4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP99D6REC4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.98■□□□□ 0.15
CFAP99D6REC4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP99D6REC4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP99D6REC4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP99D6REC4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP99D6REC4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP99D6REC4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CFAP99D6REC4 AC099063.4-201ENST00000641099 1602 ntBASIC15.97■□□□□ 0.15
CFAP99D6REC4 KRT18P28-201ENST00000453838 1332 ntBASIC15.97■□□□□ 0.15
CFAP99D6REC4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 AC007967.4-201ENST00000614700 386 ntBASIC15.97■□□□□ 0.15
CFAP99D6REC4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 DBET-201ENST00000630918 3363 ntBASIC15.97■□□□□ 0.15
CFAP99D6REC4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 NORAD-201ENST00000565493 5339 ntBASIC15.97■□□□□ 0.15
CFAP99D6REC4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP99D6REC4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.97■□□□□ 0.15
CFAP99D6REC4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 METTL21AP1-201ENST00000438852 635 ntBASIC15.96■□□□□ 0.15
CFAP99D6REC4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 AC067863.1-201ENST00000494933 530 ntBASIC15.96■□□□□ 0.15
CFAP99D6REC4 AC109322.1-201ENST00000524499 1264 ntBASIC15.96■□□□□ 0.15
CFAP99D6REC4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 AC105021.1-202ENST00000570572 669 ntBASIC15.96■□□□□ 0.15
CFAP99D6REC4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.96■□□□□ 0.15
CFAP99D6REC4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CFAP99D6REC4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CFAP99D6REC4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CFAP99D6REC4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CFAP99D6REC4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 AC104640.1-201ENST00000562617 2109 ntBASIC15.95■□□□□ 0.14
CFAP99D6REC4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms