Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 TOB2P1-201ENST00000469761 992 ntBASIC15.13■□□□□ 0.01
AP4S1Q9Y587 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 MIR5100-201ENST00000579544 119 ntBASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.13■□□□□ 0.01
AP4S1Q9Y587 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4S1Q9Y587 AC005840.4-201ENST00000541242 2494 ntBASIC15.12■□□□□ 0.01
AP4S1Q9Y587 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 AC067750.1-201ENST00000608826 6545 ntBASIC15.12■□□□□ 0.01
AP4S1Q9Y587 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TPSP2-201ENST00000561760 610 ntBASIC15.12■□□□□ 0.01
AP4S1Q9Y587 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 AC129492.6-201ENST00000611383 1305 ntBASIC15.12■□□□□ 0.01
AP4S1Q9Y587 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4S1Q9Y587 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms